{"text_format":"3","workbook":"xls","n_sheets":4,"sheets":["A3SS","A5SS","RetainedIntron","SkippedExon"],"not_rendered":{"external_links":1,"defined_names":4},"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"A3SS","index":0,"n_rows":61,"n_cols":7,"rows_kept":61,"flags":["formulas_cached_only"]}
["Table S5.1 The alternative splicing events (alternative 3' splice site acceptor) of the DlAP2/ERF superfamily detected in the NEC and embryogenic cultures of 'HHZ' cultivar."]
["Tissus","GeneID","chromosome","strand","constitutive exon","3' exon"," alternative 3' exon"]
["NEC","Dlo_000287.1","scaffold1","-","2959488-2959655","2959166-2959390","2959166-2959385"]
["NEC","Dlo_000287.1","scaffold1","-","2959783-2959949","2959488-2959655","2959488-2959650"]
["NEC","Dlo_000287.1","scaffold1","-","2959783-2959949","2959488-2959655","2959488-2959631"]
["NEC","Dlo_000287.1","scaffold1","-","2959783-2959949","2959488-2959655","2959488-2959692"]
["NEC","Dlo_000287.1","scaffold1","-","2960043-2960137","2959783-2959949","2959783-2959958"]
["NEC","Dlo_000444.1","scaffold1","+","4725579-4725900","4726072-4726705","4726060-4726705"]
["NEC","Dlo_000444.1","scaffold1","+","4727554-4727604","4727706-4727782","4727703-4727782"]
["NEC","Dlo_030750.1","scaffold8","-","566601-566800","565068-565189","565068-565198"]
["NEC","Dlo_015474.1","scaffold29","+","1495733-1495815","1495907-1496438","1495911-1496438"]
["NEC","Dlo_019916.1","scaffold40","-","902990-903170","901922-902502","901922-902493"]
["NEC","Dlo_021787.1","scaffold46","+","744064-744442","744546-744628","744552-744628"]
["NEC","Dlo_021787.1","scaffold46","+","745559-745632","745744-745794","745750-745794"]
["NEC","Dlo_023666.1","scaffold52","+","782564-782625","782817-783445","782811-783445"]
["NEC","Dlo_009234.2","scaffold1840","+","8675-8820","9152-9300","9038-9300"]
["NEC","Dlo_009234.2","scaffold1840","+","8675-8820","9152-9300","9197-9300"]
["NEC","Dlo_015581.1","scaffold2900","-","4485-4515","4276-4363","4276-4361"]
["EC","Dlo_000287.1","scaffold1","-","2960043-2960137","2959783-2959949","2959783-2959958"]
["EC","Dlo_000585.2","scaffold1","-","6822812-6822888","6822246-6822715","6822246-6822706"]
["EC","Dlo_030750.1","scaffold8","-","566601-566800","565068-565189","565068-565198"]
["EC","Dlo_021787.1","scaffold46","+","745559-745632","745744-745794","745753-745794"]
["EC","Dlo_023666.1","scaffold52","+","782389-782439","782564-782625","782561-782625"]
["EC","Dlo_023666.1","scaffold52","+","782564-782625","782817-783445","782811-783445"]
["EC","Dlo_011527.1","scaffold215","+","123703-123952","124303-124482","124360-124482"]
["EC","Dlo_004646.1","scaffold1301","+","70060-70148","70254-70327","70259-70327"]
["EC","Dlo_004646.1","scaffold1301","+","70060-70148","70254-70327","70231-70327"]
["EC","Dlo_004646.1","scaffold1301","+","70254-70327","70457-70507","70444-70507"]
["EC","Dlo_004646.1","scaffold1301","+","70598-70674","70837-71579","70826-71579"]
["EC","Dlo_009234.2","scaffold1840","+","8495-8582","8675-8820","8681-8820"]
["EC","Dlo_009234.2","scaffold1840","+","8675-8820","9152-9300","9038-9300"]
["EC","Dlo_009234.2","scaffold1840","+","8675-8820","9152-9300","9197-9300"]
["IcpEC","Dlo_000287.1","scaffold1","-","2959783-2959949","2959488-2959655","2959488-2959692"]
["IcpEC","Dlo_000287.1","scaffold1","-","2960043-2960137","2959783-2959949","2959783-2959958"]
["IcpEC","Dlo_030750.1","scaffold8","-","566601-566800","565068-565189","565068-565198"]
["IcpEC","Dlo_021787.1","scaffold46","+","744064-744442","744546-744628","744519-744628"]
["IcpEC","Dlo_021787.1","scaffold46","+","745559-745632","745744-745794","745753-745794"]
["IcpEC","Dlo_023666.1","scaffold52","+","782389-782439","782564-782625","782561-782625"]
["IcpEC","Dlo_023666.1","scaffold52","+","782564-782625","782817-783445","782811-783445"]
["IcpEC","Dlo_011527.1","scaffold215","+","123703-123952","124303-124482","124360-124482"]
["IcpEC","Dlo_011527.1","scaffold215","+","124621-125074","125355-125437","125330-125437"]
["IcpEC","Dlo_011527.1","scaffold215","+","125355-125437","125612-125620","125594-125620"]
["IcpEC","Dlo_011527.1","scaffold215","+","125915-126003","126418-126491","126423-126491"]
["IcpEC","Dlo_004646.1","scaffold1301","+","70060-70148","70254-70327","70231-70327"]
["IcpEC","Dlo_004646.1","scaffold1301","+","70457-70507","70598-70674","70595-70674"]
["IcpEC","Dlo_004646.1","scaffold1301","+","70598-70674","70837-71579","70815-71579"]
["IcpEC","Dlo_009234.2","scaffold1840","+","8675-8820","9152-9300","9038-9300"]
["IcpEC","Dlo_009234.2","scaffold1840","+","8675-8820","9152-9300","9197-9300"]
["GE","Dlo_000287.1","scaffold1","-","2960043-2960137","2959783-2959949","2959783-2959958"]
["GE","Dlo_000287.1","scaffold1","-","2961101-2961126","2960951-2960981","2960951-2961006"]
["GE","Dlo_000585.2","scaffold1","-","6823010-6823060","6822812-6822888","6822812-6822911"]
["GE","Dlo_030750.1","scaffold8","-","566601-566800","565068-565189","565068-565198"]
["GE","Dlo_021787.1","scaffold46","+","744064-744442","744546-744628","744519-744628"]
["GE","Dlo_021787.1","scaffold46","+","744546-744628","745377-745465","745086-745465"]
["GE","Dlo_023666.1","scaffold52","+","782389-782439","782564-782625","782561-782625"]
["GE","Dlo_023666.1","scaffold52","+","782564-782625","782817-783445","782811-783445"]
["GE","Dlo_014268.1","scaffold265","+","218356-218429","218640-218690","218649-218690"]
["GE","Dlo_004646.1","scaffold1301","+","70060-70148","70254-70327","70231-70327"]
["GE","Dlo_004646.1","scaffold1301","+","70598-70674","70837-71579","70815-71579"]
["GE","Dlo_009234.2","scaffold1840","+","8675-8820","9152-9300","9038-9300"]
["GE","Dlo_009234.2","scaffold1840","+","8675-8820","9152-9300","9197-9300"]

{"sheet":"A5SS","index":1,"n_rows":36,"n_cols":7,"rows_kept":36,"flags":["formulas_cached_only"]}
["Table S5.2 The alternative splicing events (5' splice site donor) of the DlAP2/ERF superfamily detected in the NEC and embryogenic cultures of 'HHZ' cultivar. "]
["Tissus","GeneID","chromosome","strand","constitutive exon","5' exon"," alternative 5' exon"]
["NEC","Dlo_000585.2","scaffold1","-","6822812-6822888","6823010-6823060","6823020-6823060"]
["NEC","Dlo_000585.2","scaffold1","-","6824971-6825544","6826037-6826184","6825737-6826184"]
["NEC","Dlo_005429.1","scaffold139","+","752994-753580","752248-752386","752248-752773"]
["NEC","Dlo_015581.1","scaffold2900","-","2307-2555","3058-3180","2875-3180"]
["NEC","Dlo_015581.1","scaffold2900","-","2307-2555","3058-3180","2905-3180"]
["NEC","Dlo_015581.1","scaffold2900","-","3058-3180","3312-3442","3315-3442"]
["NEC","Dlo_015581.1","scaffold2900","-","4016-4161","4276-4363","4302-4363"]
["EC","Dlo_000585.2","scaffold1","-","6824971-6825544","6826037-6826184","6825737-6826184"]
["EC","Dlo_030836.1","scaffold8","-","1786928-1787016","1787320-1787402","1787132-1787402"]
["EC","Dlo_007513.1","scaffold16","+","1159233-1160008","1158017-1158452","1158017-1158744"]
["EC","Dlo_007513.1","scaffold16","+","1159233-1160008","1158017-1158452","1158017-1159086"]
["EC","Dlo_007513.1","scaffold16","+","1159233-1160008","1158017-1158452","1158017-1158725"]
["EC","Dlo_007774.3","scaffold162","-","920583-920864","921667-921780","921696-921780"]
["EC","Dlo_011527.1","scaffold215","+","126418-126491","125915-126003","125915-126324"]
["EC","Dlo_009234.2","scaffold1840","+","10720-11001","9804-9917","9804-9888"]
["IcpEC","Dlo_000585.2","scaffold1","-","6824971-6825544","6826037-6826184","6825618-6826184"]
["IcpEC","Dlo_030836.1","scaffold8","-","1786928-1787016","1787320-1787402","1787132-1787402"]
["IcpEC","Dlo_007513.1","scaffold16","+","1159233-1160008","1158017-1158452","1158017-1158744"]
["IcpEC","Dlo_007513.1","scaffold16","+","1159233-1160008","1158017-1158452","1158017-1159086"]
["IcpEC","Dlo_021787.1","scaffold46","+","745744-745794","745559-745632","745559-745605"]
["IcpEC","Dlo_021787.1","scaffold46","+","745744-745794","745559-745632","745559-745662"]
["IcpEC","Dlo_011527.1","scaffold215","+","124303-124482","123703-123952","123703-124146"]
["GE","Dlo_000287.1","scaffold1","-","2959166-2959390","2959488-2959655","2959484-2959655"]
["GE","Dlo_000287.1","scaffold1","-","2960387-2960532","2960757-2960844","2960727-2960844"]
["GE","Dlo_030836.1","scaffold8","-","1786928-1787016","1787320-1787402","1787132-1787402"]
["GE","Dlo_021787.1","scaffold46","+","745377-745465","744546-744628","744546-745146"]
["GE","Dlo_021787.1","scaffold46","+","745744-745794","745559-745632","745559-745605"]
["GE","Dlo_007774.3","scaffold162","-","920583-920864","921667-921780","921696-921780"]
["GE","Dlo_011527.1","scaffold215","+","126418-126491","125915-126003","125915-126324"]
["GE","Dlo_014268.1","scaffold265","+","218640-218690","218356-218429","218356-218447"]
["GE","Dlo_024437.1","scaffold541","+","265682-266262","263510-263651","263510-263668"]
["GE","Dlo_004646.1","scaffold1301","+","69222-69594","68863-69010","68863-69122"]
["GE","Dlo_009234.2","scaffold1840","+","10720-11001","9804-9917","9804-9888"]
["GE","Dlo_015581.1","scaffold2900","-","3058-3180","3312-3442","3315-3442"]

{"sheet":"RetainedIntron","index":2,"n_rows":105,"n_cols":5,"rows_kept":105,"flags":["formulas_cached_only"]}
["Table S5.3 The alternative splicing events(intron retention) of the DlAP2/ERF superfamily detected in the NEC and embryogenic cultures of 'HHZ' cultivar. "]
["Tissus","GeneID","chromosome","strand","retained intron"]
["NEC","Dlo_000287.1","scaffold1","-","2960282-2960386"]
["NEC","Dlo_000287.1","scaffold1","-","2960533-2960756"]
["NEC","Dlo_000287.1","scaffold1","-","2960845-2960950"]
["NEC","Dlo_000287.1","scaffold1","-","2960982-2961100"]
["NEC","Dlo_000287.1","scaffold1","-","2961127-2961228"]
["NEC","Dlo_000585.2","scaffold1","-","6825545-6826036"]
["NEC","Dlo_030836.1","scaffold8","-","1784254-1786643"]
["NEC","Dlo_007513.1","scaffold16","+","1158453-1159232"]
["NEC","Dlo_013069.1","scaffold24","+","1183846-1184093"]
["NEC","Dlo_015474.1","scaffold29","+","1495816-1495906"]
["NEC","Dlo_023666.1","scaffold52","+","783446-784097"]
["NEC","Dlo_028976.1","scaffold71","+","1002341-1002496"]
["NEC","Dlo_028976.1","scaffold71","+","1002542-1002632"]
["NEC","Dlo_028976.1","scaffold71","+","1002954-1003030"]
["NEC","Dlo_006200.1","scaffold145","-","719435-719699"]
["NEC","Dlo_007774.3","scaffold162","-","922389-922502"]
["NEC","Dlo_032272.1","scaffold878","+","1145-1298"]
["NEC","Dlo_009234.2","scaffold1840","+","7841-8183"]
["NEC","Dlo_009234.2","scaffold1840","+","8210-8321"]
["NEC","Dlo_009234.2","scaffold1840","+","8353-8494"]
["NEC","Dlo_009234.2","scaffold1840","+","8583-8674"]
["NEC","Dlo_009234.2","scaffold1840","+","8821-9151"]
["NEC","Dlo_009234.2","scaffold1840","+","9301-9389"]
["NEC","Dlo_009234.2","scaffold1840","+","9518-9803"]
["NEC","Dlo_009234.2","scaffold1840","+","9918-10719"]
["NEC","Dlo_012821.1","scaffold2370","+","32130-32472"]
["NEC","Dlo_012821.1","scaffold2370","+","32499-32609"]
["NEC","Dlo_012821.1","scaffold2370","+","32641-32782"]
["NEC","Dlo_012821.1","scaffold2370","+","32871-32962"]
["NEC","Dlo_015581.1","scaffold2900","-","2556-3057"]
["NEC","Dlo_015581.1","scaffold2900","-","3644-3764"]
["NEC","Dlo_015581.1","scaffold2900","-","3810-4015"]
["NEC","Dlo_015581.1","scaffold2900","-","4162-4275"]
["NEC","Dlo_015581.1","scaffold2900","-","4364-4484"]
["NEC","Dlo_015581.1","scaffold2900","-","4516-4610"]
["EC","Dlo_000287.1","scaffold1","-","2959950-2960042"]
["EC","Dlo_021787.1","scaffold46","+","743964-744063"]
["EC","Dlo_007774.3","scaffold162","-","922389-922502"]
["EC","Dlo_004646.1","scaffold1301","+","69965-70059"]
["EC","Dlo_009234.2","scaffold1840","+","7841-8183"]
["EC","Dlo_009234.2","scaffold1840","+","8210-8321"]
["EC","Dlo_009234.2","scaffold1840","+","8353-8494"]
["EC","Dlo_009234.2","scaffold1840","+","8583-8674"]
["EC","Dlo_009234.2","scaffold1840","+","8821-9151"]
["EC","Dlo_009234.2","scaffold1840","+","9301-9389"]
["EC","Dlo_009234.2","scaffold1840","+","9518-9803"]
["IcpEC","Dlo_000287.1","scaffold1","-","2959391-2959487"]
["IcpEC","Dlo_000287.1","scaffold1","-","2959656-2959782"]
["IcpEC","Dlo_000287.1","scaffold1","-","2959950-2960042"]
["IcpEC","Dlo_000287.1","scaffold1","-","2960138-2960236"]
["IcpEC","Dlo_000287.1","scaffold1","-","2960282-2960386"]
["IcpEC","Dlo_000287.1","scaffold1","-","2960533-2960756"]
["IcpEC","Dlo_000287.1","scaffold1","-","2960845-2960950"]
["IcpEC","Dlo_000287.1","scaffold1","-","2960982-2961100"]
["IcpEC","Dlo_000287.1","scaffold1","-","2961127-2961228"]
["IcpEC","Dlo_000585.2","scaffold1","-","6822889-6823009"]
["IcpEC","Dlo_030750.1","scaffold8","-","565190-566600"]
["IcpEC","Dlo_007774.3","scaffold162","-","922389-922502"]
["IcpEC","Dlo_014268.1","scaffold265","+","217449-217632"]
["IcpEC","Dlo_014268.1","scaffold265","+","218183-218355"]
["IcpEC","Dlo_014268.1","scaffold265","+","218430-218639"]
["IcpEC","Dlo_014268.1","scaffold265","+","218691-218940"]
["IcpEC","Dlo_014268.1","scaffold265","+","219018-219767"]
["IcpEC","Dlo_024437.1","scaffold541","+","263652-265681"]
["IcpEC","Dlo_024437.1","scaffold541","+","263652-265681"]
["IcpEC","Dlo_004646.1","scaffold1301","+","69830-69955"]
["IcpEC","Dlo_004646.1","scaffold1301","+","69965-70059"]
["IcpEC","Dlo_009234.2","scaffold1840","+","7841-8183"]
["IcpEC","Dlo_009234.2","scaffold1840","+","8210-8321"]
["IcpEC","Dlo_009234.2","scaffold1840","+","8353-8494"]
["IcpEC","Dlo_009234.2","scaffold1840","+","8583-8674"]
["IcpEC","Dlo_009234.2","scaffold1840","+","8821-9151"]
["IcpEC","Dlo_009234.2","scaffold1840","+","9301-9389"]
["IcpEC","Dlo_009234.2","scaffold1840","+","9518-9803"]
["GE","Dlo_000287.1","scaffold1","-","2959391-2959487"]
["GE","Dlo_000287.1","scaffold1","-","2959656-2959782"]
["GE","Dlo_000287.1","scaffold1","-","2959950-2960042"]
["GE","Dlo_000287.1","scaffold1","-","2960138-2960236"]
["GE","Dlo_000287.1","scaffold1","-","2960282-2960386"]
["GE","Dlo_000287.1","scaffold1","-","2960533-2960756"]
["GE","Dlo_000287.1","scaffold1","-","2960845-2960950"]
["GE","Dlo_000287.1","scaffold1","-","2960982-2961100"]
["GE","Dlo_000287.1","scaffold1","-","2961127-2961228"]
["GE","Dlo_000585.2","scaffold1","-","6822889-6823009"]
["GE","Dlo_030750.1","scaffold8","-","565190-566600"]
["GE","Dlo_013069.1","scaffold24","+","1183846-1184093"]
["GE","Dlo_021787.1","scaffold46","+","744629-745376"]
["GE","Dlo_023666.1","scaffold52","+","783446-784097"]
["GE","Dlo_028976.1","scaffold71","+","1002341-1002496"]
["GE","Dlo_028976.1","scaffold71","+","1002542-1002632"]
["GE","Dlo_028976.1","scaffold71","+","1002737-1002816"]
["GE","Dlo_028976.1","scaffold71","+","1002954-1003030"]
["GE","Dlo_028976.1","scaffold71","+","1003151-1003374"]
["GE","Dlo_007774.3","scaffold162","-","922389-922502"]
["GE","Dlo_014268.1","scaffold265","+","219018-219767"]
["GE","Dlo_024437.1","scaffold541","+","263652-265681"]
["GE","Dlo_009234.2","scaffold1840","+","7841-8183"]
["GE","Dlo_009234.2","scaffold1840","+","8210-8321"]
["GE","Dlo_009234.2","scaffold1840","+","8353-8494"]
["GE","Dlo_009234.2","scaffold1840","+","8583-8674"]
["GE","Dlo_009234.2","scaffold1840","+","8821-9151"]
["GE","Dlo_009234.2","scaffold1840","+","9301-9389"]
["GE","Dlo_009234.2","scaffold1840","+","9518-9803"]

{"sheet":"SkippedExon","index":3,"n_rows":17,"n_cols":7,"rows_kept":17,"flags":["formulas_cached_only"]}
["Table S5.4 The alternative splicing events (exon skipping) of the DlAP2/ERF superfamily detected in the NEC and embryogenic cultures of 'HHZ' cultivar.  "]
["Tissus","GeneID","chromsome","strand","constitutive exon","inclusive exon","constitutive exon"]
["NEC","Dlo_028976.1","scaffold71","+","1002195-1002340","1002497-1002541","1002633-1002736"]
["NEC","Dlo_007774.3","scaffold162","-","922285-922388","922503-922547","922765-922914"]
["NEC","Dlo_015581.1","scaffold2900","-","3540-3643","3765-3809","4016-4161"]
["NEC","Dlo_015581.1","scaffold2900","-","3058-3180","3312-3442","3540-3643"]
["EC","Dlo_007774.3","scaffold162","-","922285-922388","922503-922547","922765-922914"]
["IcpEC","Dlo_007774.3","scaffold162","-","922285-922388","922503-922547","922765-922914"]
["IcpEC","Dlo_011527.1","scaffold215","+","125355-125437","125612-125620","125709-125771"]
["IcpEC","Dlo_011527.1","scaffold215","+","125355-125437","125612-125620","125915-126003"]
["IcpEC","Dlo_015581.1","scaffold2900","-","3540-3643","3765-3809","4016-4161"]
["GE","Dlo_007774.3","scaffold162","-","922285-922388","922503-922547","922765-922914"]
["GE","Dlo_007774.3","scaffold162","-","920583-920864","921667-921780,922068-922195,922285-922388,922503-922547","922765-922914"]
["GE","Dlo_011527.1","scaffold215","+","125355-125437","125612-125620","125709-125771"]
["GE","Dlo_011527.1","scaffold215","+","125355-125437","125612-125620","125915-126003"]
["GE","Dlo_009234.2","scaffold1840","+","8675-8820","9152-9300,9390-9517,9804-9917","10720-11001"]
["GE","Dlo_015581.1","scaffold2900","-","3540-3643","3765-3809","4016-4161"]